Research Group Hiltbrunner

Light Perception and Signalling in Plants

Institute of Biology II, Department of Molecular Plant Physiology, Faculty of Biology, University of Freiburg

Links

University of Freiburg

• Akademisches Wörterbuch der Universität Freiburg
• Search for University of Freiburg employees
• University of Freiburg - legal information
• Campus management - HISinOne - Räume suchen
• Formulare & Downloads
• Course overview - Vorlesungsverzeichnis
• Semester dates and teaching periods
• Web-to-Print - Unidruckerei Freiburg
• ILIAS - zentrale Lernplattorm der Universität Freiburg
• Modulhandbücher Fakultät für Biologie/Module guides Faculty of Biology

---

MolBiol Tools

• NCBI BLAST - Basic Local Alignment Search Tool
• Sequence manipulation suite: Reverse translate
• CBS prediction servers - predict NES, signal peptides, transit peptides, ...
• NLS Mapper: Prediction of nuclear localisation signals
• NLStradamus: Prediction of nuclear localisation signals
• PSORT: Prediction of protein sorting signals
• The Arabidopsis protein phosphorylation site database
• Web-based tool for accessing the diurnal and circadian genome-wide expression results
• NCBI taxonomy browser

---

Other Tools

• Centrifuge rotor speed calculator
• Lighting radiation conversion
• Create weblogos online
• Online file transfer
• Convert docx, pptx, ... to pdf; compress pdf files

---

Databases

Bibliographic Databases

• Web of Science
• PubMed - bibliographic database

Genome/Protein Databases

• Phytozome - Plant comparative genomics portal
• UniProt - resource of protein sequence and functional information
• TAIR - Arabidopsis genome database
• Arabidopsis transcription factor database
• Cosmoss - Physcomitrella patens genome/EST database
• miRBase - microRNA database
• 1001 Genomes - Arabidopsis ecotype collection

Protein Interaction Databases

• BioGRID - repository for interaction datasets
• Arabidopsis interactome network map
• IntAct - protein interaction database
• STRING - known and predicted protein-protein interactions

Other Databases

• Addgene - plasmid/vector database
• Algaebase - algae information resource
• Database of fluorescent dyes and applications
• Database of fluorescent dyes and spectra viewer
• JASPAR - database of transcription factor binding profiles

---

Arabidopsis, Physcomitrella

• TAIR - The Arabidopsis informative resources
• ABRC - about Arabidopsis
• T-DNAexpress - Arabidopsis gene mapping tool
• NASC - The European Arabidopsis stock centre
• RIKEN bioresource center
• Arabidopsis eFP browser
• Arabidopsis chromosome map tool
• 101 ways to grow Arabidopsis
• Physcobase - protocols and DNA database for Physcomitrella

---

Online Books/Movies/Tutorials

• Plant Physiology online
• iBiology - Biology lectures online
• Plants in motion - time-lapse movies of plants
• Nikon - microscopy tutorials
• Nikon - introduction to fluorescent proteins
• Olympus - introduction to fluorescent proteins
• Zeiss - introduction to fluorescent proteins
• Photobiological sciences online
• The complete work of Charles Darwin online
• The work of Alfred Russel Wallace online